Description
This syllabus assumes a 15-week semester, meeting once or twice a week for a standard laboratory period (e.g., 2-3 hours). Adjustments may be needed based on the specific needs of your institution, class, and available resources. Course Title: Statistical Biology Laboratory Instructor: Course Description: This laboratory course is designed to complement the concepts covered in the Statistical Biology lecture course. Students will gain hands-on experience with statistical methods and tools commonly used in biological research. Practical skills will be developed through data analysis, interpretation, and presentation. Week 1-2: Introduction to R Programming and Data Handling Overview of R programming language Basics of data types, data structures, and functions Importing and manipulating biological data in R Exploratory data analysis (EDA) techniques Week 3-4: Descriptive Statistics in Biology Mean, median, and mode calculations Variability and standard deviation Box plots and histograms for biological datasets Interpretation of summary statistics Week 5-6: Probability and Distributions in Biology Probability distributions in biology (normal, binomial, Poisson) Sampling distributions and the Central Limit Theorem Confidence intervals and hypothesis testing Week 7-8: Statistical Inference in Genetics Hardy-Weinberg equilibrium testing Chi-square tests for genetic data Introduction to genetic linkage analysis Week 9-10: Regression Analysis in Ecology Simple linear regression Multiple linear regression Interpretation of regression models in ecological studies Practical applications in ecology Week 11-12: Bioinformatics and Computational Biology Introduction to bioinformatics tools and databases Sequence alignment and analysis Genome-wide association studies (GWAS) Week 13-14: Population Dynamics and Epidemiology Modeling population growth and dynamics Analysis of epidemiological data Spatial analysis in disease ecology Week 15: Final Project and Presentation Students work on a final project applying statistical methods to a biological dataset of their choice Prepare a written report and give a short presentation to the class Assessment: Weekly Lab Reports: 30% Midterm Exam: 20% Final Project and Presentation: 30% Participation and Attendance: 20% Textbook: "Statistical Methods in Biology" by Ronald A. Fisher and John H. McDonald Software: R Statistical Software, Bioconductor, and relevant bioinformatics tools.
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